Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl47Q8K2Y7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mrpl47Q8K2Y7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mrpl47Q8K2Y7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mrpl47Q8K2Y7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl47Q8K2Y7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl47Q8K2Y7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl47Q8K2Y7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl47Q8K2Y7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl47Q8K2Y7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl47Q8K2Y7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms