Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4rl1Q8K0S5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4rl1Q8K0S5 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.95■□□□□ 0.78
Rtn4rl1Q8K0S5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rl1Q8K0S5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 AA386476-201ENSMUST00000098781 1665 ntBASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rl1Q8K0S5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Gm5408-201ENSMUST00000197998 747 ntBASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.92■□□□□ 0.78
Rtn4rl1Q8K0S5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rl1Q8K0S5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rl1Q8K0S5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn4rl1Q8K0S5 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.89■□□□□ 0.77
Rtn4rl1Q8K0S5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4rl1Q8K0S5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4rl1Q8K0S5 Gm8520-201ENSMUST00000186517 868 ntBASIC19.89■□□□□ 0.77
Rtn4rl1Q8K0S5 Gm20049-201ENSMUST00000219950 730 ntBASIC19.89■□□□□ 0.77
Rtn4rl1Q8K0S5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4rl1Q8K0S5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Gm10252-201ENSMUST00000209541 832 ntBASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rl1Q8K0S5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rtn4rl1Q8K0S5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms