Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1aQ8CIG0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Depdc1aQ8CIG0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Depdc1aQ8CIG0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Depdc1aQ8CIG0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Depdc1aQ8CIG0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Depdc1aQ8CIG0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Depdc1aQ8CIG0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Depdc1aQ8CIG0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.13■■□□□ 1.13
Depdc1aQ8CIG0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Depdc1aQ8CIG0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Depdc1aQ8CIG0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Depdc1aQ8CIG0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Depdc1aQ8CIG0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Depdc1aQ8CIG0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
Depdc1aQ8CIG0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Depdc1aQ8CIG0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Gm37179-201ENSMUST00000194862 823 ntBASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Depdc1aQ8CIG0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.1■■□□□ 1.13
Depdc1aQ8CIG0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Depdc1aQ8CIG0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.1■■□□□ 1.13
Depdc1aQ8CIG0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Depdc1aQ8CIG0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Depdc1aQ8CIG0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Depdc1aQ8CIG0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Depdc1aQ8CIG0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Depdc1aQ8CIG0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Depdc1aQ8CIG0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Depdc1aQ8CIG0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.09■■□□□ 1.13
Depdc1aQ8CIG0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Depdc1aQ8CIG0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Depdc1aQ8CIG0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Depdc1aQ8CIG0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.08■■□□□ 1.12
Depdc1aQ8CIG0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Depdc1aQ8CIG0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.08■■□□□ 1.12
Depdc1aQ8CIG0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms