Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Gm27405-201ENSMUST00000184201 112 ntBASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.05■□□□□ 0.64
Rdh1Q8CGV4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 AV356131-201ENSMUST00000206201 750 ntBASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh1Q8CGV4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Reep4-203ENSMUST00000226563 1444 ntBASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.03■□□□□ 0.64
Rdh1Q8CGV4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.02■□□□□ 0.64
Rdh1Q8CGV4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rdh1Q8CGV4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rdh1Q8CGV4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rdh1Q8CGV4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.01■□□□□ 0.63
Rdh1Q8CGV4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Gm13234-201ENSMUST00000120010 747 ntBASIC19■□□□□ 0.63
Rdh1Q8CGV4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rdh1Q8CGV4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19■□□□□ 0.63
Rdh1Q8CGV4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh1Q8CGV4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rdh1Q8CGV4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh1Q8CGV4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms