Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.44■□□□□ 0.38
ShfQ8CG80 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ShfQ8CG80 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShfQ8CG80 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShfQ8CG80 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ShfQ8CG80 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ShfQ8CG80 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShfQ8CG80 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ShfQ8CG80 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.43■□□□□ 0.38
ShfQ8CG80 Gm15546-201ENSMUST00000122095 826 ntBASIC17.43■□□□□ 0.38
ShfQ8CG80 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShfQ8CG80 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.43■□□□□ 0.38
ShfQ8CG80 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShfQ8CG80 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
ShfQ8CG80 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShfQ8CG80 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShfQ8CG80 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ShfQ8CG80 Gm22238-201ENSMUST00000175222 88 ntBASIC17.42■□□□□ 0.38
ShfQ8CG80 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.42■□□□□ 0.38
ShfQ8CG80 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.42■□□□□ 0.38
ShfQ8CG80 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.42■□□□□ 0.38
ShfQ8CG80 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ShfQ8CG80 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShfQ8CG80 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShfQ8CG80 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ShfQ8CG80 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShfQ8CG80 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShfQ8CG80 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ShfQ8CG80 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
ShfQ8CG80 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShfQ8CG80 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.41■□□□□ 0.38
ShfQ8CG80 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.41■□□□□ 0.38
ShfQ8CG80 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.41■□□□□ 0.38
ShfQ8CG80 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.41■□□□□ 0.38
ShfQ8CG80 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShfQ8CG80 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShfQ8CG80 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShfQ8CG80 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShfQ8CG80 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShfQ8CG80 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ShfQ8CG80 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.4■□□□□ 0.38
ShfQ8CG80 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ShfQ8CG80 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShfQ8CG80 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ShfQ8CG80 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.4■□□□□ 0.38
ShfQ8CG80 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShfQ8CG80 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ShfQ8CG80 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ShfQ8CG80 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ShfQ8CG80 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
ShfQ8CG80 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
ShfQ8CG80 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.39■□□□□ 0.38
ShfQ8CG80 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShfQ8CG80 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShfQ8CG80 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ShfQ8CG80 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.39■□□□□ 0.37
ShfQ8CG80 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShfQ8CG80 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShfQ8CG80 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ShfQ8CG80 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.38■□□□□ 0.37
ShfQ8CG80 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ShfQ8CG80 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ShfQ8CG80 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ShfQ8CG80 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShfQ8CG80 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ShfQ8CG80 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.37■□□□□ 0.37
ShfQ8CG80 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
ShfQ8CG80 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ShfQ8CG80 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShfQ8CG80 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShfQ8CG80 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms