Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim52Q8CDV4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim52Q8CDV4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC24.42■■□□□ 1.5
Trim52Q8CDV4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim52Q8CDV4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24.42■■□□□ 1.5
Trim52Q8CDV4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim52Q8CDV4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim52Q8CDV4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Trim52Q8CDV4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim52Q8CDV4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Trim52Q8CDV4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
Trim52Q8CDV4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Trim52Q8CDV4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim52Q8CDV4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim52Q8CDV4 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.39■■□□□ 1.49
Trim52Q8CDV4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC24.39■■□□□ 1.49
Trim52Q8CDV4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim52Q8CDV4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim52Q8CDV4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Trim52Q8CDV4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim52Q8CDV4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Trim52Q8CDV4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim52Q8CDV4 Gm27011-201ENSMUST00000182352 972 ntBASIC24.38■■□□□ 1.49
Trim52Q8CDV4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim52Q8CDV4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.37■■□□□ 1.49
Trim52Q8CDV4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.37■■□□□ 1.49
Trim52Q8CDV4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Trim52Q8CDV4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Trim52Q8CDV4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim52Q8CDV4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC24.36■■□□□ 1.49
Trim52Q8CDV4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.36■■□□□ 1.49
Trim52Q8CDV4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim52Q8CDV4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim52Q8CDV4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim52Q8CDV4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim52Q8CDV4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Trim52Q8CDV4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim52Q8CDV4 Gm13534-201ENSMUST00000121169 513 ntBASIC24.34■■□□□ 1.49
Trim52Q8CDV4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim52Q8CDV4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC24.34■■□□□ 1.49
Trim52Q8CDV4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim52Q8CDV4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim52Q8CDV4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim52Q8CDV4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Trim52Q8CDV4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim52Q8CDV4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.33■■□□□ 1.49
Trim52Q8CDV4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
Trim52Q8CDV4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim52Q8CDV4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Trim52Q8CDV4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24.33■■□□□ 1.48
Trim52Q8CDV4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Trim52Q8CDV4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim52Q8CDV4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim52Q8CDV4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Trim52Q8CDV4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim52Q8CDV4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Trim52Q8CDV4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim52Q8CDV4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Trim52Q8CDV4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim52Q8CDV4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC24.3■■□□□ 1.48
Trim52Q8CDV4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim52Q8CDV4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.3■■□□□ 1.48
Trim52Q8CDV4 Gm6802-201ENSMUST00000167843 1983 ntBASIC24.3■■□□□ 1.48
Trim52Q8CDV4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Gm12669-201ENSMUST00000122162 1009 ntBASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.29■■□□□ 1.48
Trim52Q8CDV4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC24.28■■□□□ 1.48
Trim52Q8CDV4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Mir5133-201ENSMUST00000174955 77 ntBASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms