Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cabcoco1Q8CDT7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cabcoco1Q8CDT7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
Cabcoco1Q8CDT7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cabcoco1Q8CDT7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cabcoco1Q8CDT7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cabcoco1Q8CDT7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Golph3-205ENSMUST00000228671 2842 ntBASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cabcoco1Q8CDT7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cabcoco1Q8CDT7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Mir6538-201ENSMUST00000183713 110 ntBASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Gm7143-201ENSMUST00000222811 859 ntBASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Cabcoco1Q8CDT7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cabcoco1Q8CDT7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cabcoco1Q8CDT7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cabcoco1Q8CDT7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cabcoco1Q8CDT7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cabcoco1Q8CDT7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cabcoco1Q8CDT7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cabcoco1Q8CDT7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Cabcoco1Q8CDT7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms