Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcpip1Q8CDG3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcpip1Q8CDG3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vcpip1Q8CDG3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcpip1Q8CDG3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcpip1Q8CDG3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Vcpip1Q8CDG3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcpip1Q8CDG3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcpip1Q8CDG3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Golph3-205ENSMUST00000228671 2842 ntBASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcpip1Q8CDG3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vcpip1Q8CDG3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.94■□□□□ 0.94
Vcpip1Q8CDG3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Gm21956-201ENSMUST00000179946 522 ntBASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Vcpip1Q8CDG3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcpip1Q8CDG3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.91■□□□□ 0.94
Vcpip1Q8CDG3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcpip1Q8CDG3 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.91■□□□□ 0.94
Vcpip1Q8CDG3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcpip1Q8CDG3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcpip1Q8CDG3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcpip1Q8CDG3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Vcpip1Q8CDG3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vcpip1Q8CDG3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcpip1Q8CDG3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.89■□□□□ 0.93
Vcpip1Q8CDG3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcpip1Q8CDG3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms