Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd4Q8CC84 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd4Q8CC84 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd4Q8CC84 Gm43530-201ENSMUST00000195920 274 ntBASIC17.52■□□□□ 0.4
Lysmd4Q8CC84 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lysmd4Q8CC84 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Gm10232-201ENSMUST00000089221 720 ntBASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 BC021767-201ENSMUST00000126387 1716 ntBASIC17.5■□□□□ 0.39
Lysmd4Q8CC84 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd4Q8CC84 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd4Q8CC84 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lysmd4Q8CC84 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd4Q8CC84 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lysmd4Q8CC84 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms