Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lin9Q8C735 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.34■■□□□ 1.01
Lin9Q8C735 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.34■■□□□ 1.01
Lin9Q8C735 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Lin9Q8C735 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.34■■□□□ 1.01
Lin9Q8C735 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin9Q8C735 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lin9Q8C735 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lin9Q8C735 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.33■■□□□ 1.01
Lin9Q8C735 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.33■■□□□ 1.01
Lin9Q8C735 Gm43173-201ENSMUST00000202246 593 ntBASIC21.33■■□□□ 1.01
Lin9Q8C735 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lin9Q8C735 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lin9Q8C735 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lin9Q8C735 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lin9Q8C735 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lin9Q8C735 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.32■■□□□ 1
Lin9Q8C735 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.32■■□□□ 1
Lin9Q8C735 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Lin9Q8C735 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.32■■□□□ 1
Lin9Q8C735 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lin9Q8C735 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Lin9Q8C735 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lin9Q8C735 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Lin9Q8C735 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Lin9Q8C735 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lin9Q8C735 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lin9Q8C735 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Lin9Q8C735 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Lin9Q8C735 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.3■■□□□ 1
Lin9Q8C735 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lin9Q8C735 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lin9Q8C735 Gm12251-201ENSMUST00000117893 792 ntBASIC21.3■■□□□ 1
Lin9Q8C735 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Lin9Q8C735 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lin9Q8C735 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lin9Q8C735 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Lin9Q8C735 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lin9Q8C735 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.29■■□□□ 1
Lin9Q8C735 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin9Q8C735 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Lin9Q8C735 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lin9Q8C735 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Lin9Q8C735 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Lin9Q8C735 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lin9Q8C735 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.28■■□□□ 1
Lin9Q8C735 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lin9Q8C735 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lin9Q8C735 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Lin9Q8C735 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lin9Q8C735 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.27■■□□□ 1
Lin9Q8C735 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Lin9Q8C735 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
Lin9Q8C735 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
Lin9Q8C735 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lin9Q8C735 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.27■■□□□ 1
Lin9Q8C735 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lin9Q8C735 Gm5874-201ENSMUST00000096101 508 ntBASIC21.27■■□□□ 1
Lin9Q8C735 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lin9Q8C735 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Lin9Q8C735 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin9Q8C735 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lin9Q8C735 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lin9Q8C735 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lin9Q8C735 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lin9Q8C735 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin9Q8C735 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.26■□□□□ 0.99
Lin9Q8C735 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lin9Q8C735 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lin9Q8C735 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lin9Q8C735 Spcs1-204ENSMUST00000226782 949 ntBASIC21.25■□□□□ 0.99
Lin9Q8C735 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lin9Q8C735 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lin9Q8C735 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lin9Q8C735 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lin9Q8C735 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lin9Q8C735 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.24■□□□□ 0.99
Lin9Q8C735 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lin9Q8C735 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lin9Q8C735 Gm26833-201ENSMUST00000180899 440 ntBASIC21.24■□□□□ 0.99
Lin9Q8C735 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lin9Q8C735 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lin9Q8C735 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.24■□□□□ 0.99
Lin9Q8C735 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.24■□□□□ 0.99
Lin9Q8C735 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lin9Q8C735 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms