Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19■□□□□ 0.63
Cfap54Q8C6S9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap54Q8C6S9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19■□□□□ 0.63
Cfap54Q8C6S9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap54Q8C6S9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.99■□□□□ 0.63
Cfap54Q8C6S9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap54Q8C6S9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap54Q8C6S9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap54Q8C6S9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap54Q8C6S9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap54Q8C6S9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cfap54Q8C6S9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.95■□□□□ 0.62
Cfap54Q8C6S9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap54Q8C6S9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap54Q8C6S9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap54Q8C6S9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.95■□□□□ 0.62
Cfap54Q8C6S9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap54Q8C6S9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Gm27275-201ENSMUST00000184318 272 ntBASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap54Q8C6S9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 Gm13836-201ENSMUST00000121159 501 ntBASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cfap54Q8C6S9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.92■□□□□ 0.62
Cfap54Q8C6S9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.91■□□□□ 0.62
Cfap54Q8C6S9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms