Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Brat1Q8C3R1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brat1Q8C3R1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Brat1Q8C3R1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.64■□□□□ 0.9
Brat1Q8C3R1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brat1Q8C3R1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Brat1Q8C3R1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.63■□□□□ 0.89
Brat1Q8C3R1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brat1Q8C3R1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Brat1Q8C3R1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brat1Q8C3R1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brat1Q8C3R1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.62■□□□□ 0.89
Brat1Q8C3R1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Brat1Q8C3R1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.62■□□□□ 0.89
Brat1Q8C3R1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Brat1Q8C3R1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Brat1Q8C3R1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brat1Q8C3R1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brat1Q8C3R1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Gm27801-201ENSMUST00000184174 223 ntBASIC20.59■□□□□ 0.89
Brat1Q8C3R1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brat1Q8C3R1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Brat1Q8C3R1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Brat1Q8C3R1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Brat1Q8C3R1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
Brat1Q8C3R1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Brat1Q8C3R1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Brat1Q8C3R1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Brat1Q8C3R1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brat1Q8C3R1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brat1Q8C3R1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brat1Q8C3R1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms