Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Usp44Q8C2S0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Usp44Q8C2S0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Usp44Q8C2S0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Usp44Q8C2S0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Usp44Q8C2S0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
Usp44Q8C2S0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23■■□□□ 1.27
Usp44Q8C2S0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp44Q8C2S0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Usp44Q8C2S0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Usp44Q8C2S0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Usp44Q8C2S0 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.98■■□□□ 1.27
Usp44Q8C2S0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp44Q8C2S0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp44Q8C2S0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Usp44Q8C2S0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.96■■□□□ 1.27
Usp44Q8C2S0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp44Q8C2S0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.95■■□□□ 1.26
Usp44Q8C2S0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp44Q8C2S0 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.95■■□□□ 1.26
Usp44Q8C2S0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp44Q8C2S0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp44Q8C2S0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp44Q8C2S0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Gm11421-201ENSMUST00000122124 294 ntBASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Gm26833-201ENSMUST00000180899 440 ntBASIC22.93■■□□□ 1.26
Usp44Q8C2S0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.93■■□□□ 1.26
Usp44Q8C2S0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Usp44Q8C2S0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp44Q8C2S0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp44Q8C2S0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp44Q8C2S0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Usp44Q8C2S0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.91■■□□□ 1.26
Usp44Q8C2S0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Usp44Q8C2S0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms