Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne1Q8C166 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne1Q8C166 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne1Q8C166 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne1Q8C166 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne1Q8C166 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Gm8493-201ENSMUST00000196881 489 ntBASIC18.24■□□□□ 0.51
Cpne1Q8C166 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Gm6139-201ENSMUST00000079261 882 ntBASIC18.24■□□□□ 0.51
Cpne1Q8C166 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne1Q8C166 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne1Q8C166 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne1Q8C166 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne1Q8C166 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.22■□□□□ 0.51
Cpne1Q8C166 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
Cpne1Q8C166 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.22■□□□□ 0.51
Cpne1Q8C166 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.22■□□□□ 0.51
Cpne1Q8C166 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.22■□□□□ 0.51
Cpne1Q8C166 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.22■□□□□ 0.51
Cpne1Q8C166 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cpne1Q8C166 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne1Q8C166 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne1Q8C166 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cpne1Q8C166 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne1Q8C166 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cpne1Q8C166 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cpne1Q8C166 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.2■□□□□ 0.5
Cpne1Q8C166 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpne1Q8C166 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne1Q8C166 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne1Q8C166 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne1Q8C166 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne1Q8C166 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.19■□□□□ 0.5
Cpne1Q8C166 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne1Q8C166 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Gm43173-201ENSMUST00000202246 593 ntBASIC18.18■□□□□ 0.5
Cpne1Q8C166 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cpne1Q8C166 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms