Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atg16l1Q8C0J2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg16l1Q8C0J2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atg16l1Q8C0J2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.47■□□□□ 0.71
Atg16l1Q8C0J2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg16l1Q8C0J2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.46■□□□□ 0.71
Atg16l1Q8C0J2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg16l1Q8C0J2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Atg16l1Q8C0J2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Cap2-205ENSMUST00000225824 1634 ntBASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg16l1Q8C0J2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg16l1Q8C0J2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atg16l1Q8C0J2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Atg16l1Q8C0J2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg16l1Q8C0J2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms