Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.89■□□□□ 0.77
Sh3rf2Q8BZT2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sh3rf2Q8BZT2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf2Q8BZT2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf2Q8BZT2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf2Q8BZT2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sh3rf2Q8BZT2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sh3rf2Q8BZT2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf2Q8BZT2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3rf2Q8BZT2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3rf2Q8BZT2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3rf2Q8BZT2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3rf2Q8BZT2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf2Q8BZT2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms