Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 AC135637.1-201ENSMUST00000227750 365 ntBASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 AC154266.1-201ENSMUST00000223190 503 ntBASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 Mir7071-201ENSMUST00000184847 69 ntBASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Col16a1Q8BLX7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col16a1Q8BLX7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Col16a1Q8BLX7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col16a1Q8BLX7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Col16a1Q8BLX7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col16a1Q8BLX7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col16a1Q8BLX7 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.1■■□□□ 1.77
Col16a1Q8BLX7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col16a1Q8BLX7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col16a1Q8BLX7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col16a1Q8BLX7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Col16a1Q8BLX7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col16a1Q8BLX7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC26.08■■□□□ 1.77
Col16a1Q8BLX7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Col16a1Q8BLX7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Col16a1Q8BLX7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC26.08■■□□□ 1.77
Col16a1Q8BLX7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col16a1Q8BLX7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Col16a1Q8BLX7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Col16a1Q8BLX7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Col16a1Q8BLX7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col16a1Q8BLX7 Gm43909-201ENSMUST00000203443 1876 ntBASIC26.05■■□□□ 1.76
Col16a1Q8BLX7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.05■■□□□ 1.76
Col16a1Q8BLX7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col16a1Q8BLX7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col16a1Q8BLX7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC26.05■■□□□ 1.76
Col16a1Q8BLX7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC26.05■■□□□ 1.76
Col16a1Q8BLX7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 Gm22325-201ENSMUST00000158904 308 ntBASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col16a1Q8BLX7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col16a1Q8BLX7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Gm15043-201ENSMUST00000118843 1543 ntBASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms