Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smg1Q8BKX6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smg1Q8BKX6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smg1Q8BKX6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Smg1Q8BKX6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Smg1Q8BKX6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smg1Q8BKX6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smg1Q8BKX6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.77■□□□□ 0.28
Smg1Q8BKX6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smg1Q8BKX6 Gm11643-201ENSMUST00000119578 864 ntBASIC16.77■□□□□ 0.28
Smg1Q8BKX6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smg1Q8BKX6 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.77■□□□□ 0.27
Smg1Q8BKX6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smg1Q8BKX6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smg1Q8BKX6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smg1Q8BKX6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smg1Q8BKX6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smg1Q8BKX6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smg1Q8BKX6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.75■□□□□ 0.27
Smg1Q8BKX6 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.75■□□□□ 0.27
Smg1Q8BKX6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smg1Q8BKX6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smg1Q8BKX6 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smg1Q8BKX6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg1Q8BKX6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Gm5643-201ENSMUST00000117081 966 ntBASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smg1Q8BKX6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Gm6420-201ENSMUST00000193885 723 ntBASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms