Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Gm5075-201ENSMUST00000196916 622 ntBASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcal1Q8BJL0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcal1Q8BJL0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcal1Q8BJL0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Smarcal1Q8BJL0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcal1Q8BJL0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcal1Q8BJL0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcal1Q8BJL0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcal1Q8BJL0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcal1Q8BJL0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcal1Q8BJL0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcal1Q8BJL0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcal1Q8BJL0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcal1Q8BJL0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcal1Q8BJL0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Smarcal1Q8BJL0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcal1Q8BJL0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.81■□□□□ 0.92
Smarcal1Q8BJL0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcal1Q8BJL0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcal1Q8BJL0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcal1Q8BJL0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 AA386476-201ENSMUST00000098781 1665 ntBASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcal1Q8BJL0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Gm13534-201ENSMUST00000121169 513 ntBASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms