Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tdp1Q8BJ37 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tdp1Q8BJ37 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tdp1Q8BJ37 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tdp1Q8BJ37 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.7■■□□□ 1.06
Tdp1Q8BJ37 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.7■■□□□ 1.06
Tdp1Q8BJ37 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 AA386476-201ENSMUST00000098781 1665 ntBASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tdp1Q8BJ37 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Tdp1Q8BJ37 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tdp1Q8BJ37 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.67■■□□□ 1.06
Tdp1Q8BJ37 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.67■■□□□ 1.06
Tdp1Q8BJ37 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tdp1Q8BJ37 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tdp1Q8BJ37 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tdp1Q8BJ37 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.67■■□□□ 1.06
Tdp1Q8BJ37 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tdp1Q8BJ37 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tdp1Q8BJ37 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Gm4968-201ENSMUST00000071458 858 ntBASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tdp1Q8BJ37 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Tdp1Q8BJ37 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tdp1Q8BJ37 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Tdp1Q8BJ37 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tdp1Q8BJ37 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.64■■□□□ 1.05
Tdp1Q8BJ37 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Tdp1Q8BJ37 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.64■■□□□ 1.05
Tdp1Q8BJ37 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.64■■□□□ 1.05
Tdp1Q8BJ37 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Gm6420-201ENSMUST00000193885 723 ntBASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tdp1Q8BJ37 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Gm10653-202ENSMUST00000139570 835 ntBASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tdp1Q8BJ37 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Gm13148-201ENSMUST00000118892 745 ntBASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Gm6365-201ENSMUST00000054711 744 ntBASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tdp1Q8BJ37 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms