Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3bQ8BHK2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3bQ8BHK2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn3bQ8BHK2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Gm10420-201ENSMUST00000121713 882 ntBASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3bQ8BHK2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3bQ8BHK2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scn3bQ8BHK2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3bQ8BHK2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3bQ8BHK2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms