Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smndc1Q8BGT7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Smndc1Q8BGT7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smndc1Q8BGT7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.82■□□□□ 0.6
Smndc1Q8BGT7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smndc1Q8BGT7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.8■□□□□ 0.6
Smndc1Q8BGT7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smndc1Q8BGT7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smndc1Q8BGT7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms