Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Gm13148-201ENSMUST00000118892 745 ntBASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Gm6365-201ENSMUST00000054711 744 ntBASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Npas4Q8BGD7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.71■□□□□ 0.91
Npas4Q8BGD7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npas4Q8BGD7 AA386476-201ENSMUST00000098781 1665 ntBASIC20.7■□□□□ 0.91
Npas4Q8BGD7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Gm6420-201ENSMUST00000193885 723 ntBASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Npas4Q8BGD7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Gm13534-201ENSMUST00000121169 513 ntBASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Gm20760-201ENSMUST00000179197 648 ntBASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npas4Q8BGD7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Gm5408-201ENSMUST00000197998 747 ntBASIC20.68■□□□□ 0.9
Npas4Q8BGD7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npas4Q8BGD7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npas4Q8BGD7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Gm12527-201ENSMUST00000117967 564 ntBASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Npas4Q8BGD7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npas4Q8BGD7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms