Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atpaf1Q811I0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atpaf1Q811I0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.96■□□□□ 0.15
Atpaf1Q811I0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atpaf1Q811I0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Atpaf1Q811I0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Atpaf1Q811I0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.96■□□□□ 0.15
Atpaf1Q811I0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Atpaf1Q811I0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Atpaf1Q811I0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Atpaf1Q811I0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Atpaf1Q811I0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Atpaf1Q811I0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Gm6311-201ENSMUST00000073790 878 ntBASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Atpaf1Q811I0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Atpaf1Q811I0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Atpaf1Q811I0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.91■□□□□ 0.14
Atpaf1Q811I0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Atpaf1Q811I0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atpaf1Q811I0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atpaf1Q811I0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms