Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx42Q810A7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx42Q810A7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx42Q810A7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx42Q810A7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ddx42Q810A7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.69■□□□□ 0.74
Ddx42Q810A7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx42Q810A7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.68■□□□□ 0.74
Ddx42Q810A7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.68■□□□□ 0.74
Ddx42Q810A7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.68■□□□□ 0.74
Ddx42Q810A7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.68■□□□□ 0.74
Ddx42Q810A7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ddx42Q810A7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.67■□□□□ 0.74
Ddx42Q810A7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.67■□□□□ 0.74
Ddx42Q810A7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx42Q810A7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.66■□□□□ 0.74
Ddx42Q810A7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.66■□□□□ 0.74
Ddx42Q810A7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.66■□□□□ 0.74
Ddx42Q810A7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ddx42Q810A7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx42Q810A7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ddx42Q810A7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Ddx42Q810A7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ddx42Q810A7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ddx42Q810A7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx42Q810A7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx42Q810A7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ddx42Q810A7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx42Q810A7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx42Q810A7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx42Q810A7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.63■□□□□ 0.73
Ddx42Q810A7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx42Q810A7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.63■□□□□ 0.73
Ddx42Q810A7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx42Q810A7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ddx42Q810A7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx42Q810A7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx42Q810A7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx42Q810A7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx42Q810A7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx42Q810A7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
Ddx42Q810A7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.61■□□□□ 0.73
Ddx42Q810A7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx42Q810A7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx42Q810A7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx42Q810A7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ddx42Q810A7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.6■□□□□ 0.73
Ddx42Q810A7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx42Q810A7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms