Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk3bQ80YF6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk3bQ80YF6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk3bQ80YF6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bQ80YF6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.47■□□□□ 0.23
Upk3bQ80YF6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bQ80YF6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bQ80YF6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Upk3bQ80YF6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.46■□□□□ 0.23
Upk3bQ80YF6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Upk3bQ80YF6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.46■□□□□ 0.23
Upk3bQ80YF6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bQ80YF6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bQ80YF6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Upk3bQ80YF6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.46■□□□□ 0.22
Upk3bQ80YF6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Upk3bQ80YF6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bQ80YF6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bQ80YF6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bQ80YF6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bQ80YF6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.44■□□□□ 0.22
Upk3bQ80YF6 Gm9870-201ENSMUST00000063874 645 ntBASIC16.44■□□□□ 0.22
Upk3bQ80YF6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Upk3bQ80YF6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Upk3bQ80YF6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bQ80YF6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk3bQ80YF6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk3bQ80YF6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms