Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm3Q80WV7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Srrm3Q80WV7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.3■□□□□ 0.84
Srrm3Q80WV7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm3Q80WV7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm3Q80WV7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm3Q80WV7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.3■□□□□ 0.84
Srrm3Q80WV7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Gm29257-201ENSMUST00000186115 639 ntBASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm3Q80WV7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm3Q80WV7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Gm22238-201ENSMUST00000175222 88 ntBASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Gm27454-201ENSMUST00000185090 204 ntBASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.27■□□□□ 0.84
Srrm3Q80WV7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Srrm3Q80WV7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Srrm3Q80WV7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm3Q80WV7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.25■□□□□ 0.83
Srrm3Q80WV7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Srrm3Q80WV7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Srrm3Q80WV7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.24■□□□□ 0.83
Srrm3Q80WV7 Gm18284-201ENSMUST00000172604 624 ntBASIC20.24■□□□□ 0.83
Srrm3Q80WV7 Gm45417-201ENSMUST00000209533 758 ntBASIC20.24■□□□□ 0.83
Srrm3Q80WV7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Srrm3Q80WV7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Srrm3Q80WV7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Gm12922-201ENSMUST00000120626 809 ntBASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Srrm3Q80WV7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms