Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm12441-201ENSMUST00000121806 588 ntBASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Gm10252-201ENSMUST00000209541 832 ntBASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf40bQ80W14 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf40bQ80W14 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf40bQ80W14 Gm22325-201ENSMUST00000158904 308 ntBASIC22.54■■□□□ 1.2
Prpf40bQ80W14 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf40bQ80W14 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf40bQ80W14 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf40bQ80W14 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.52■■□□□ 1.2
Prpf40bQ80W14 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf40bQ80W14 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Prpf40bQ80W14 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.52■■□□□ 1.19
Prpf40bQ80W14 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.51■■□□□ 1.19
Prpf40bQ80W14 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf40bQ80W14 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Prpf40bQ80W14 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Prpf40bQ80W14 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf40bQ80W14 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf40bQ80W14 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.51■■□□□ 1.19
Prpf40bQ80W14 Gm22240-201ENSMUST00000175225 82 ntBASIC22.51■■□□□ 1.19
Prpf40bQ80W14 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prpf40bQ80W14 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prpf40bQ80W14 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prpf40bQ80W14 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prpf40bQ80W14 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prpf40bQ80W14 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prpf40bQ80W14 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Prpf40bQ80W14 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Prpf40bQ80W14 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prpf40bQ80W14 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Prpf40bQ80W14 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms