Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3tc2Q80VA5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Nespas-201ENSMUST00000143738 1083 ntBASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Sh3tc2Q80VA5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Sh3tc2Q80VA5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc2Q80VA5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.27■□□□□ 0.99
Sh3tc2Q80VA5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3tc2Q80VA5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Gm7514-201ENSMUST00000209475 934 ntBASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc2Q80VA5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 Gm10653-202ENSMUST00000139570 835 ntBASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc2Q80VA5 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.24■□□□□ 0.99
Sh3tc2Q80VA5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc2Q80VA5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sh3tc2Q80VA5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc2Q80VA5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc2Q80VA5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sh3tc2Q80VA5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc2Q80VA5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Gm12441-201ENSMUST00000121806 588 ntBASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc2Q80VA5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc2Q80VA5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc2Q80VA5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc2Q80VA5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc2Q80VA5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc2Q80VA5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc2Q80VA5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sh3tc2Q80VA5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Mir6236-201ENSMUST00000184437 123 ntBASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3tc2Q80VA5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms