Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Slit1Q80TR4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Slit1Q80TR4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
Slit1Q80TR4 AC135637.1-201ENSMUST00000227750 365 ntBASIC25.4■■□□□ 1.66
Slit1Q80TR4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Slit1Q80TR4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Slit1Q80TR4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC25.39■■□□□ 1.66
Slit1Q80TR4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Slit1Q80TR4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Slit1Q80TR4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Slit1Q80TR4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Slit1Q80TR4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Slit1Q80TR4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Slit1Q80TR4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Slit1Q80TR4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
Slit1Q80TR4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC25.37■■□□□ 1.65
Slit1Q80TR4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slit1Q80TR4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Slit1Q80TR4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slit1Q80TR4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slit1Q80TR4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Slit1Q80TR4 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.37■■□□□ 1.65
Slit1Q80TR4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slit1Q80TR4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Slit1Q80TR4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slit1Q80TR4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slit1Q80TR4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
Slit1Q80TR4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slit1Q80TR4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slit1Q80TR4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Slit1Q80TR4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Slit1Q80TR4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slit1Q80TR4 AA386476-201ENSMUST00000098781 1665 ntBASIC25.35■■□□□ 1.65
Slit1Q80TR4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slit1Q80TR4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Slit1Q80TR4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC25.35■■□□□ 1.65
Slit1Q80TR4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slit1Q80TR4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slit1Q80TR4 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.35■■□□□ 1.65
Slit1Q80TR4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Slit1Q80TR4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Slit1Q80TR4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Slit1Q80TR4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Slit1Q80TR4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC25.33■■□□□ 1.65
Slit1Q80TR4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Slit1Q80TR4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC25.33■■□□□ 1.64
Slit1Q80TR4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Slit1Q80TR4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Slit1Q80TR4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slit1Q80TR4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC25.32■■□□□ 1.64
Slit1Q80TR4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slit1Q80TR4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slit1Q80TR4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC25.32■■□□□ 1.64
Slit1Q80TR4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Slit1Q80TR4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slit1Q80TR4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Slit1Q80TR4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC25.31■■□□□ 1.64
Slit1Q80TR4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC25.31■■□□□ 1.64
Slit1Q80TR4 Trmt13-210ENSMUST00000198454 880 ntBASIC25.31■■□□□ 1.64
Slit1Q80TR4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Slit1Q80TR4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slit1Q80TR4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slit1Q80TR4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slit1Q80TR4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slit1Q80TR4 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.3■■□□□ 1.64
Slit1Q80TR4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC25.3■■□□□ 1.64
Slit1Q80TR4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slit1Q80TR4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Slit1Q80TR4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Slit1Q80TR4 Gm44878-201ENSMUST00000205812 1295 ntBASIC25.3■■□□□ 1.64
Slit1Q80TR4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slit1Q80TR4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
Slit1Q80TR4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slit1Q80TR4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slit1Q80TR4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slit1Q80TR4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms