Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.01■□□□□ 0.47
Pif1Q80SX8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.01■□□□□ 0.47
Pif1Q80SX8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.01■□□□□ 0.47
Pif1Q80SX8 Gm12504-201ENSMUST00000120860 2231 ntBASIC18■□□□□ 0.47
Pif1Q80SX8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Pif1Q80SX8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pif1Q80SX8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Gm12933-201ENSMUST00000120203 872 ntBASIC18■□□□□ 0.47
Pif1Q80SX8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pif1Q80SX8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pif1Q80SX8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pif1Q80SX8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pif1Q80SX8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pif1Q80SX8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pif1Q80SX8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pif1Q80SX8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.98■□□□□ 0.47
Pif1Q80SX8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pif1Q80SX8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pif1Q80SX8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pif1Q80SX8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pif1Q80SX8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pif1Q80SX8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pif1Q80SX8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Pif1Q80SX8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pif1Q80SX8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.96■□□□□ 0.47
Pif1Q80SX8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pif1Q80SX8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.96■□□□□ 0.47
Pif1Q80SX8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pif1Q80SX8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Pif1Q80SX8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.95■□□□□ 0.46
Pif1Q80SX8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pif1Q80SX8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pif1Q80SX8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pif1Q80SX8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.93■□□□□ 0.46
Pif1Q80SX8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pif1Q80SX8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms