Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 AV356131-201ENSMUST00000206201 750 ntBASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubfd1Q78JW9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubfd1Q78JW9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubfd1Q78JW9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubfd1Q78JW9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ubfd1Q78JW9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubfd1Q78JW9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ubfd1Q78JW9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubfd1Q78JW9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.08■□□□□ 0.64
Ubfd1Q78JW9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Ubfd1Q78JW9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ubfd1Q78JW9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubfd1Q78JW9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubfd1Q78JW9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ubfd1Q78JW9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.06■□□□□ 0.64
Ubfd1Q78JW9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubfd1Q78JW9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubfd1Q78JW9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubfd1Q78JW9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.06■□□□□ 0.64
Ubfd1Q78JW9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubfd1Q78JW9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubfd1Q78JW9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubfd1Q78JW9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubfd1Q78JW9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ubfd1Q78JW9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.02■□□□□ 0.64
Ubfd1Q78JW9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.02■□□□□ 0.64
Ubfd1Q78JW9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.02■□□□□ 0.64
Ubfd1Q78JW9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.02■□□□□ 0.64
Ubfd1Q78JW9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubfd1Q78JW9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.02■□□□□ 0.63
Ubfd1Q78JW9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubfd1Q78JW9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ubfd1Q78JW9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.01■□□□□ 0.63
Ubfd1Q78JW9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.01■□□□□ 0.63
Ubfd1Q78JW9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubfd1Q78JW9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubfd1Q78JW9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ubfd1Q78JW9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubfd1Q78JW9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ubfd1Q78JW9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ubfd1Q78JW9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ubfd1Q78JW9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubfd1Q78JW9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ubfd1Q78JW9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ubfd1Q78JW9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ubfd1Q78JW9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms