Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg5Q71M36 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg5Q71M36 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg5Q71M36 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg5Q71M36 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg5Q71M36 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.15■□□□□ 0.82
Cspg5Q71M36 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Cspg5Q71M36 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Cspg5Q71M36 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cspg5Q71M36 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cspg5Q71M36 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cspg5Q71M36 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cspg5Q71M36 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cspg5Q71M36 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg5Q71M36 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg5Q71M36 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Cspg5Q71M36 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cspg5Q71M36 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cspg5Q71M36 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cspg5Q71M36 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cspg5Q71M36 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cspg5Q71M36 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg5Q71M36 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cspg5Q71M36 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.09■□□□□ 0.81
Cspg5Q71M36 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cspg5Q71M36 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cspg5Q71M36 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cspg5Q71M36 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cspg5Q71M36 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cspg5Q71M36 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.08■□□□□ 0.81
Cspg5Q71M36 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.08■□□□□ 0.81
Cspg5Q71M36 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cspg5Q71M36 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.08■□□□□ 0.8
Cspg5Q71M36 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cspg5Q71M36 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms