Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Npc1l1Q6T3U4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Npc1l1Q6T3U4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
Npc1l1Q6T3U4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Npc1l1Q6T3U4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.58■■□□□ 1.36
Npc1l1Q6T3U4 Gm27011-201ENSMUST00000182352 972 ntBASIC23.58■■□□□ 1.36
Npc1l1Q6T3U4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.58■■□□□ 1.36
Npc1l1Q6T3U4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Npc1l1Q6T3U4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Gm42778-201ENSMUST00000199644 553 ntBASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Npc1l1Q6T3U4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Npc1l1Q6T3U4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 AA386476-201ENSMUST00000098781 1665 ntBASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Npc1l1Q6T3U4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Gm27801-201ENSMUST00000184174 223 ntBASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Npc1l1Q6T3U4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Npc1l1Q6T3U4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Npc1l1Q6T3U4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Npc1l1Q6T3U4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Npc1l1Q6T3U4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Npc1l1Q6T3U4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Npc1l1Q6T3U4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Npc1l1Q6T3U4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Npc1l1Q6T3U4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Npc1l1Q6T3U4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Npc1l1Q6T3U4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Npc1l1Q6T3U4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Npc1l1Q6T3U4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms