Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.68■□□□□ 0.74
Rad54bQ6PFE3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rad54bQ6PFE3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rad54bQ6PFE3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.68■□□□□ 0.74
Rad54bQ6PFE3 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.68■□□□□ 0.74
Rad54bQ6PFE3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rad54bQ6PFE3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rad54bQ6PFE3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rad54bQ6PFE3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Gm9959-201ENSMUST00000068277 390 ntBASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rad54bQ6PFE3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Rad54bQ6PFE3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rad54bQ6PFE3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
Rad54bQ6PFE3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rad54bQ6PFE3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rad54bQ6PFE3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rad54bQ6PFE3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rad54bQ6PFE3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rad54bQ6PFE3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rad54bQ6PFE3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rad54bQ6PFE3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rad54bQ6PFE3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rad54bQ6PFE3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms