Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Gm6211-202ENSMUST00000167849 925 ntBASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.28■□□□□ 0.36
Snrnp40Q6PE01 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp40Q6PE01 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Snrnp40Q6PE01 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snrnp40Q6PE01 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snrnp40Q6PE01 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Gm13534-201ENSMUST00000121169 513 ntBASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp40Q6PE01 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Snrnp40Q6PE01 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 Gm37856-201ENSMUST00000191634 999 ntBASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 Gm10812-201ENSMUST00000099864 546 ntBASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp40Q6PE01 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Mir7071-201ENSMUST00000184847 69 ntBASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp40Q6PE01 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Snrnp40Q6PE01 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms