Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Gm26524-201ENSMUST00000192339 390 ntBASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 AA386476-201ENSMUST00000098781 1665 ntBASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Nespas-201ENSMUST00000143738 1083 ntBASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chd4Q6PDQ2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Gm13534-201ENSMUST00000121169 513 ntBASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Chd4Q6PDQ2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Chd4Q6PDQ2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.95■■□□□ 1.75
Chd4Q6PDQ2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Gm10655-201ENSMUST00000098658 1397 ntBASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Chd4Q6PDQ2 Gm10653-202ENSMUST00000139570 835 ntBASIC25.94■■□□□ 1.74
Chd4Q6PDQ2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Chd4Q6PDQ2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Chd4Q6PDQ2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.93■■□□□ 1.74
Chd4Q6PDQ2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.93■■□□□ 1.74
Chd4Q6PDQ2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Chd4Q6PDQ2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC25.93■■□□□ 1.74
Chd4Q6PDQ2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Chd4Q6PDQ2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC25.93■■□□□ 1.74
Chd4Q6PDQ2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Chd4Q6PDQ2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.91■■□□□ 1.74
Chd4Q6PDQ2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Chd4Q6PDQ2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Chd4Q6PDQ2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
Chd4Q6PDQ2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Chd4Q6PDQ2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Chd4Q6PDQ2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Chd4Q6PDQ2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC25.89■■□□□ 1.74
Chd4Q6PDQ2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.89■■□□□ 1.74
Chd4Q6PDQ2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Chd4Q6PDQ2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Chd4Q6PDQ2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.89■■□□□ 1.73
Chd4Q6PDQ2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Chd4Q6PDQ2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
Chd4Q6PDQ2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
Chd4Q6PDQ2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chd4Q6PDQ2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC25.88■■□□□ 1.73
Chd4Q6PDQ2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chd4Q6PDQ2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chd4Q6PDQ2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chd4Q6PDQ2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chd4Q6PDQ2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Chd4Q6PDQ2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chd4Q6PDQ2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Gm7290-201ENSMUST00000104990 617 ntBASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Gm12918-201ENSMUST00000120234 636 ntBASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms