Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.78■■□□□ 1.08
Abcf1Q6P542 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Abcf1Q6P542 Gm13241-201ENSMUST00000094493 780 ntBASIC21.78■■□□□ 1.08
Abcf1Q6P542 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Abcf1Q6P542 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Abcf1Q6P542 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Abcf1Q6P542 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Abcf1Q6P542 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Abcf1Q6P542 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Abcf1Q6P542 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Abcf1Q6P542 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Abcf1Q6P542 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Abcf1Q6P542 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Abcf1Q6P542 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Abcf1Q6P542 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Abcf1Q6P542 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Abcf1Q6P542 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Abcf1Q6P542 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcf1Q6P542 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abcf1Q6P542 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Abcf1Q6P542 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Abcf1Q6P542 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abcf1Q6P542 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abcf1Q6P542 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.75■■□□□ 1.07
Abcf1Q6P542 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Gm9870-201ENSMUST00000063874 645 ntBASIC21.74■■□□□ 1.07
Abcf1Q6P542 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.74■■□□□ 1.07
Abcf1Q6P542 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.73■■□□□ 1.07
Abcf1Q6P542 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
Abcf1Q6P542 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Abcf1Q6P542 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcf1Q6P542 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Abcf1Q6P542 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Abcf1Q6P542 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Abcf1Q6P542 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Abcf1Q6P542 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.71■■□□□ 1.07
Abcf1Q6P542 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Abcf1Q6P542 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.71■■□□□ 1.07
Abcf1Q6P542 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Abcf1Q6P542 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Abcf1Q6P542 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.7■■□□□ 1.06
Abcf1Q6P542 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Abcf1Q6P542 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Abcf1Q6P542 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.69■■□□□ 1.06
Abcf1Q6P542 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.69■■□□□ 1.06
Abcf1Q6P542 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Abcf1Q6P542 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Abcf1Q6P542 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms