Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Gm6139-201ENSMUST00000079261 882 ntBASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Casc4Q6P2L7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Casc4Q6P2L7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.73■□□□□ 0.75
Casc4Q6P2L7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.73■□□□□ 0.75
Casc4Q6P2L7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc4Q6P2L7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casc4Q6P2L7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc4Q6P2L7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casc4Q6P2L7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Casc4Q6P2L7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc4Q6P2L7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casc4Q6P2L7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc4Q6P2L7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc4Q6P2L7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms