Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhga7Q6DD96 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga7Q6DD96 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga7Q6DD96 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga7Q6DD96 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhga7Q6DD96 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga7Q6DD96 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Gm45102-201ENSMUST00000207427 857 ntBASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhga7Q6DD96 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga7Q6DD96 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Gm14117-201ENSMUST00000122417 843 ntBASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga7Q6DD96 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga7Q6DD96 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhga7Q6DD96 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga7Q6DD96 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 Rps24-207ENSMUST00000224568 714 ntBASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhga7Q6DD96 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga7Q6DD96 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhga7Q6DD96 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.83■□□□□ 0.6
Pcdhga7Q6DD96 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga7Q6DD96 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga7Q6DD96 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga7Q6DD96 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms