Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ss18Q62280 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ss18Q62280 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Ss18Q62280 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ss18Q62280 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ss18Q62280 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ss18Q62280 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ss18Q62280 Gm7143-201ENSMUST00000222811 859 ntBASIC14.41□□□□□ -0.1
Ss18Q62280 Gm5812-201ENSMUST00000061073 957 ntBASIC14.41□□□□□ -0.1
Ss18Q62280 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ss18Q62280 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ss18Q62280 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.4□□□□□ -0.1
Ss18Q62280 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.4□□□□□ -0.1
Ss18Q62280 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.4□□□□□ -0.1
Ss18Q62280 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ss18Q62280 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.4□□□□□ -0.1
Ss18Q62280 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ss18Q62280 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ss18Q62280 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ss18Q62280 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Ss18Q62280 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ss18Q62280 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ss18Q62280 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ss18Q62280 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ss18Q62280 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ss18Q62280 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ss18Q62280 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ss18Q62280 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ss18Q62280 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.38□□□□□ -0.11
Ss18Q62280 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.38□□□□□ -0.11
Ss18Q62280 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ss18Q62280 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.38□□□□□ -0.11
Ss18Q62280 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.38□□□□□ -0.11
Ss18Q62280 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.38□□□□□ -0.11
Ss18Q62280 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ss18Q62280 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ss18Q62280 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.38□□□□□ -0.11
Ss18Q62280 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ss18Q62280 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ss18Q62280 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.37□□□□□ -0.11
Ss18Q62280 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.37□□□□□ -0.11
Ss18Q62280 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.37□□□□□ -0.11
Ss18Q62280 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ss18Q62280 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 Gm7417-201ENSMUST00000192950 473 ntBASIC14.36□□□□□ -0.11
Ss18Q62280 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ss18Q62280 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ss18Q62280 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ss18Q62280 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms