Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Foxc1Q61572 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.22□□□□□ -0.13
Foxc1Q61572 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.22□□□□□ -0.13
Foxc1Q61572 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Foxc1Q61572 Gm43017-201ENSMUST00000198296 752 ntBASIC14.22□□□□□ -0.13
Foxc1Q61572 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.22□□□□□ -0.13
Foxc1Q61572 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Foxc1Q61572 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.22□□□□□ -0.13
Foxc1Q61572 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Foxc1Q61572 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.21□□□□□ -0.13
Foxc1Q61572 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxc1Q61572 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxc1Q61572 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxc1Q61572 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxc1Q61572 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxc1Q61572 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Foxc1Q61572 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Foxc1Q61572 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.2□□□□□ -0.14
Foxc1Q61572 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Foxc1Q61572 Gm6139-201ENSMUST00000079261 882 ntBASIC14.2□□□□□ -0.14
Foxc1Q61572 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.2□□□□□ -0.14
Foxc1Q61572 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxc1Q61572 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.19□□□□□ -0.14
Foxc1Q61572 Gm8493-201ENSMUST00000196881 489 ntBASIC14.19□□□□□ -0.14
Foxc1Q61572 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Foxc1Q61572 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Foxc1Q61572 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxc1Q61572 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Foxc1Q61572 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Foxc1Q61572 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Foxc1Q61572 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.18□□□□□ -0.14
Foxc1Q61572 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Foxc1Q61572 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.18□□□□□ -0.14
Foxc1Q61572 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Foxc1Q61572 Gm8495-201ENSMUST00000188740 694 ntBASIC14.18□□□□□ -0.14
Foxc1Q61572 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Foxc1Q61572 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.17□□□□□ -0.14
Foxc1Q61572 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Foxc1Q61572 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Foxc1Q61572 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms