Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx2Q61412 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx2Q61412 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.99■□□□□ 0.63
Vsx2Q61412 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vsx2Q61412 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx2Q61412 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx2Q61412 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx2Q61412 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vsx2Q61412 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx2Q61412 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx2Q61412 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx2Q61412 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vsx2Q61412 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx2Q61412 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.98■□□□□ 0.63
Vsx2Q61412 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.98■□□□□ 0.63
Vsx2Q61412 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx2Q61412 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.97■□□□□ 0.63
Vsx2Q61412 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.97■□□□□ 0.63
Vsx2Q61412 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.97■□□□□ 0.63
Vsx2Q61412 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vsx2Q61412 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vsx2Q61412 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vsx2Q61412 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx2Q61412 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.97■□□□□ 0.63
Vsx2Q61412 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Gm6139-201ENSMUST00000079261 882 ntBASIC18.96■□□□□ 0.63
Vsx2Q61412 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Vsx2Q61412 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx2Q61412 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx2Q61412 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx2Q61412 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx2Q61412 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx2Q61412 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.95■□□□□ 0.62
Vsx2Q61412 Gm8493-201ENSMUST00000196881 489 ntBASIC18.95■□□□□ 0.62
Vsx2Q61412 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Vsx2Q61412 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.95■□□□□ 0.62
Vsx2Q61412 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx2Q61412 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx2Q61412 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx2Q61412 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vsx2Q61412 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx2Q61412 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx2Q61412 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx2Q61412 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx2Q61412 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.94■□□□□ 0.62
Vsx2Q61412 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Vsx2Q61412 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vsx2Q61412 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx2Q61412 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vsx2Q61412 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx2Q61412 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
Vsx2Q61412 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx2Q61412 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.94■□□□□ 0.62
Vsx2Q61412 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Vsx2Q61412 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Vsx2Q61412 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.93■□□□□ 0.62
Vsx2Q61412 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.93■□□□□ 0.62
Vsx2Q61412 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx2Q61412 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.92■□□□□ 0.62
Vsx2Q61412 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Vsx2Q61412 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Gm12251-201ENSMUST00000117893 792 ntBASIC18.92■□□□□ 0.62
Vsx2Q61412 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.92■□□□□ 0.62
Vsx2Q61412 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.92■□□□□ 0.62
Vsx2Q61412 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx2Q61412 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms