Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scnn1aQ61180 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scnn1aQ61180 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scnn1aQ61180 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scnn1aQ61180 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scnn1aQ61180 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
Scnn1aQ61180 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.63■■□□□ 1.21
Scnn1aQ61180 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scnn1aQ61180 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scnn1aQ61180 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scnn1aQ61180 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.62■■□□□ 1.21
Scnn1aQ61180 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Scnn1aQ61180 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.62■■□□□ 1.21
Scnn1aQ61180 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scnn1aQ61180 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.61■■□□□ 1.21
Scnn1aQ61180 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.61■■□□□ 1.21
Scnn1aQ61180 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scnn1aQ61180 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Gm13146-201ENSMUST00000118508 780 ntBASIC22.6■■□□□ 1.21
Scnn1aQ61180 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scnn1aQ61180 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.59■■□□□ 1.21
Scnn1aQ61180 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scnn1aQ61180 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scnn1aQ61180 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scnn1aQ61180 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scnn1aQ61180 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scnn1aQ61180 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.59■■□□□ 1.21
Scnn1aQ61180 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scnn1aQ61180 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scnn1aQ61180 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Scnn1aQ61180 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scnn1aQ61180 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Scnn1aQ61180 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Scnn1aQ61180 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.58■■□□□ 1.21
Scnn1aQ61180 Gm7514-201ENSMUST00000209475 934 ntBASIC22.58■■□□□ 1.21
Scnn1aQ61180 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scnn1aQ61180 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Scnn1aQ61180 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Scnn1aQ61180 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scnn1aQ61180 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scnn1aQ61180 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Scnn1aQ61180 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scnn1aQ61180 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Scnn1aQ61180 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scnn1aQ61180 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.57■■□□□ 1.2
Scnn1aQ61180 Gm38205-201ENSMUST00000192243 258 ntBASIC22.57■■□□□ 1.2
Scnn1aQ61180 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scnn1aQ61180 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scnn1aQ61180 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scnn1aQ61180 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Scnn1aQ61180 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scnn1aQ61180 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms