Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC28.75■■■□□ 2.19
Ptch1Q61115 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptch1Q61115 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptch1Q61115 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptch1Q61115 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptch1Q61115 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptch1Q61115 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ptch1Q61115 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC28.74■■■□□ 2.19
Ptch1Q61115 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC28.74■■■□□ 2.19
Ptch1Q61115 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ptch1Q61115 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptch1Q61115 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptch1Q61115 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptch1Q61115 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptch1Q61115 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptch1Q61115 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ptch1Q61115 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ptch1Q61115 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ptch1Q61115 Gm5643-201ENSMUST00000117081 966 ntBASIC28.71■■■□□ 2.19
Ptch1Q61115 Gm12896-201ENSMUST00000118430 226 ntBASIC28.71■■■□□ 2.19
Ptch1Q61115 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ptch1Q61115 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC28.71■■■□□ 2.19
Ptch1Q61115 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
Ptch1Q61115 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Ptch1Q61115 Gm715-201ENSMUST00000117865 831 ntBASIC28.7■■■□□ 2.19
Ptch1Q61115 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ptch1Q61115 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ptch1Q61115 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ptch1Q61115 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ptch1Q61115 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ptch1Q61115 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Ptch1Q61115 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Ptch1Q61115 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC28.69■■■□□ 2.18
Ptch1Q61115 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ptch1Q61115 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ptch1Q61115 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ptch1Q61115 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ptch1Q61115 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Ptch1Q61115 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ptch1Q61115 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ptch1Q61115 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Ptch1Q61115 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
Ptch1Q61115 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ptch1Q61115 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Ptch1Q61115 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ptch1Q61115 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ptch1Q61115 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
Ptch1Q61115 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Ptch1Q61115 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC28.67■■■□□ 2.18
Ptch1Q61115 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ptch1Q61115 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ptch1Q61115 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ptch1Q61115 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ptch1Q61115 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ptch1Q61115 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
Ptch1Q61115 Gm6576-201ENSMUST00000169678 883 ntBASIC28.66■■■□□ 2.18
Ptch1Q61115 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC28.66■■■□□ 2.18
Ptch1Q61115 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ptch1Q61115 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC28.66■■■□□ 2.18
Ptch1Q61115 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptch1Q61115 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Ptch1Q61115 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC28.65■■■□□ 2.18
Ptch1Q61115 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC28.65■■■□□ 2.18
Ptch1Q61115 AL672049.1-201ENSMUST00000197943 91 ntBASIC28.65■■■□□ 2.18
Ptch1Q61115 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptch1Q61115 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Ptch1Q61115 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ptch1Q61115 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ptch1Q61115 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
Ptch1Q61115 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ptch1Q61115 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC28.64■■■□□ 2.18
Ptch1Q61115 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ptch1Q61115 AC131586.2-201ENSMUST00000228370 1512 ntBASIC28.64■■■□□ 2.17
Ptch1Q61115 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Ptch1Q61115 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ptch1Q61115 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Ptch1Q61115 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC28.63■■■□□ 2.17
Ptch1Q61115 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ptch1Q61115 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Ptch1Q61115 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ptch1Q61115 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Ptch1Q61115 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Ptch1Q61115 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Ptch1Q61115 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ptch1Q61115 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ptch1Q61115 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Ptch1Q61115 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Ptch1Q61115 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC28.62■■■□□ 2.17
Ptch1Q61115 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ptch1Q61115 Gm15565-201ENSMUST00000118890 427 ntBASIC28.61■■■□□ 2.17
Ptch1Q61115 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC28.61■■■□□ 2.17
Ptch1Q61115 Arhgef33-211ENSMUST00000225658 473 ntBASIC28.61■■■□□ 2.17
Ptch1Q61115 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
Ptch1Q61115 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ptch1Q61115 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ptch1Q61115 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ptch1Q61115 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ptch1Q61115 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptch1Q61115 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptch1Q61115 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms