Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.42■□□□□ 0.22
Scarb1Q61009 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scarb1Q61009 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Scarb1Q61009 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scarb1Q61009 Gm45444-201ENSMUST00000211394 898 ntBASIC16.41■□□□□ 0.22
Scarb1Q61009 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.41■□□□□ 0.22
Scarb1Q61009 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scarb1Q61009 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scarb1Q61009 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.4■□□□□ 0.22
Scarb1Q61009 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.4■□□□□ 0.22
Scarb1Q61009 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.4■□□□□ 0.22
Scarb1Q61009 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scarb1Q61009 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scarb1Q61009 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scarb1Q61009 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scarb1Q61009 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.39■□□□□ 0.21
Scarb1Q61009 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scarb1Q61009 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.39■□□□□ 0.21
Scarb1Q61009 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.39■□□□□ 0.21
Scarb1Q61009 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.39■□□□□ 0.21
Scarb1Q61009 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scarb1Q61009 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Scarb1Q61009 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scarb1Q61009 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.38■□□□□ 0.21
Scarb1Q61009 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.38■□□□□ 0.21
Scarb1Q61009 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.38■□□□□ 0.21
Scarb1Q61009 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scarb1Q61009 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.37■□□□□ 0.21
Scarb1Q61009 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
Scarb1Q61009 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scarb1Q61009 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Scarb1Q61009 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scarb1Q61009 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scarb1Q61009 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scarb1Q61009 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scarb1Q61009 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scarb1Q61009 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.36■□□□□ 0.21
Scarb1Q61009 Gm10399-202ENSMUST00000202768 748 ntBASIC16.36■□□□□ 0.21
Scarb1Q61009 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scarb1Q61009 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scarb1Q61009 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Scarb1Q61009 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Scarb1Q61009 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms