Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Col12a1Q60847 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col12a1Q60847 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col12a1Q60847 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.7■□□□□ 0.74
Col12a1Q60847 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.7■□□□□ 0.74
Col12a1Q60847 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Col12a1Q60847 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col12a1Q60847 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col12a1Q60847 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col12a1Q60847 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col12a1Q60847 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col12a1Q60847 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col12a1Q60847 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col12a1Q60847 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col12a1Q60847 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Col12a1Q60847 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col12a1Q60847 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col12a1Q60847 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col12a1Q60847 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col12a1Q60847 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col12a1Q60847 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.67■□□□□ 0.74
Col12a1Q60847 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.67■□□□□ 0.74
Col12a1Q60847 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col12a1Q60847 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col12a1Q60847 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col12a1Q60847 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col12a1Q60847 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Col12a1Q60847 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col12a1Q60847 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.67■□□□□ 0.74
Col12a1Q60847 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col12a1Q60847 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col12a1Q60847 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.66■□□□□ 0.74
Col12a1Q60847 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.66■□□□□ 0.74
Col12a1Q60847 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.66■□□□□ 0.74
Col12a1Q60847 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col12a1Q60847 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col12a1Q60847 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col12a1Q60847 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col12a1Q60847 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col12a1Q60847 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Gm38205-201ENSMUST00000192243 258 ntBASIC19.65■□□□□ 0.74
Col12a1Q60847 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col12a1Q60847 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col12a1Q60847 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Gm37055-201ENSMUST00000191866 133 ntBASIC19.65■□□□□ 0.74
Col12a1Q60847 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.65■□□□□ 0.74
Col12a1Q60847 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col12a1Q60847 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Col12a1Q60847 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col12a1Q60847 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col12a1Q60847 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col12a1Q60847 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.64■□□□□ 0.73
Col12a1Q60847 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.64■□□□□ 0.73
Col12a1Q60847 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col12a1Q60847 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col12a1Q60847 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col12a1Q60847 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.64■□□□□ 0.73
Col12a1Q60847 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.64■□□□□ 0.73
Col12a1Q60847 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col12a1Q60847 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Col12a1Q60847 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col12a1Q60847 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col12a1Q60847 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Gm9987-201ENSMUST00000069768 567 ntBASIC19.63■□□□□ 0.73
Col12a1Q60847 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col12a1Q60847 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Col12a1Q60847 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col12a1Q60847 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.62■□□□□ 0.73
Col12a1Q60847 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col12a1Q60847 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col12a1Q60847 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.62■□□□□ 0.73
Col12a1Q60847 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col12a1Q60847 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.61■□□□□ 0.73
Col12a1Q60847 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col12a1Q60847 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.61■□□□□ 0.73
Col12a1Q60847 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col12a1Q60847 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.61■□□□□ 0.73
Col12a1Q60847 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col12a1Q60847 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms