Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NfkbibQ60778 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NfkbibQ60778 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NfkbibQ60778 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NfkbibQ60778 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NfkbibQ60778 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.65■■□□□ 1.38
NfkbibQ60778 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NfkbibQ60778 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
NfkbibQ60778 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
NfkbibQ60778 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NfkbibQ60778 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
NfkbibQ60778 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.64■■□□□ 1.37
NfkbibQ60778 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NfkbibQ60778 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NfkbibQ60778 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
NfkbibQ60778 Gm42642-201ENSMUST00000200683 355 ntBASIC23.64■■□□□ 1.37
NfkbibQ60778 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NfkbibQ60778 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NfkbibQ60778 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NfkbibQ60778 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.64■■□□□ 1.37
NfkbibQ60778 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NfkbibQ60778 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NfkbibQ60778 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
NfkbibQ60778 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NfkbibQ60778 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.63■■□□□ 1.37
NfkbibQ60778 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NfkbibQ60778 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NfkbibQ60778 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NfkbibQ60778 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NfkbibQ60778 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC23.62■■□□□ 1.37
NfkbibQ60778 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.62■■□□□ 1.37
NfkbibQ60778 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NfkbibQ60778 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NfkbibQ60778 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NfkbibQ60778 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
NfkbibQ60778 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
NfkbibQ60778 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NfkbibQ60778 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NfkbibQ60778 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NfkbibQ60778 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NfkbibQ60778 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.61■■□□□ 1.37
NfkbibQ60778 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NfkbibQ60778 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NfkbibQ60778 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NfkbibQ60778 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NfkbibQ60778 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NfkbibQ60778 Gm26571-201ENSMUST00000181399 666 ntBASIC23.6■■□□□ 1.37
NfkbibQ60778 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.6■■□□□ 1.37
NfkbibQ60778 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
NfkbibQ60778 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NfkbibQ60778 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NfkbibQ60778 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.59■■□□□ 1.37
NfkbibQ60778 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NfkbibQ60778 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NfkbibQ60778 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NfkbibQ60778 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
NfkbibQ60778 Gm10849-201ENSMUST00000100397 618 ntBASIC23.59■■□□□ 1.37
NfkbibQ60778 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
NfkbibQ60778 Gm10033-202ENSMUST00000211874 928 ntBASIC23.59■■□□□ 1.37
NfkbibQ60778 Gm9988-201ENSMUST00000069786 435 ntBASIC23.59■■□□□ 1.37
NfkbibQ60778 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NfkbibQ60778 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NfkbibQ60778 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NfkbibQ60778 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.59■■□□□ 1.37
NfkbibQ60778 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NfkbibQ60778 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
NfkbibQ60778 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NfkbibQ60778 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.58■■□□□ 1.37
NfkbibQ60778 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.58■■□□□ 1.37
NfkbibQ60778 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.58■■□□□ 1.37
NfkbibQ60778 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NfkbibQ60778 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
NfkbibQ60778 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
NfkbibQ60778 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NfkbibQ60778 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
NfkbibQ60778 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
NfkbibQ60778 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.56■■□□□ 1.36
NfkbibQ60778 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
NfkbibQ60778 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NfkbibQ60778 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
NfkbibQ60778 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NfkbibQ60778 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
NfkbibQ60778 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NfkbibQ60778 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NfkbibQ60778 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NfkbibQ60778 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NfkbibQ60778 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
NfkbibQ60778 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NfkbibQ60778 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NfkbibQ60778 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms