Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav2Q5R1I9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Gm27801-201ENSMUST00000184174 223 ntBASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav2Q5R1I9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Gm42778-201ENSMUST00000199644 553 ntBASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Gm42642-201ENSMUST00000200683 355 ntBASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Gm18671-201ENSMUST00000214826 683 ntBASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav2Q5R1I9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.53■□□□□ 0.08
Trav2Q5R1I9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.53■□□□□ 0.08
Trav2Q5R1I9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav2Q5R1I9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav2Q5R1I9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav2Q5R1I9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav2Q5R1I9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav2Q5R1I9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav2Q5R1I9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Trav2Q5R1I9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav2Q5R1I9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav2Q5R1I9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Gm42569-201ENSMUST00000200539 472 ntBASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav2Q5R1I9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav2Q5R1I9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.49■□□□□ 0.07
Trav2Q5R1I9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Gm9988-201ENSMUST00000069786 435 ntBASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav2Q5R1I9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms