Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Vps41Q5KU39 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Vps41Q5KU39 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps41Q5KU39 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Vps41Q5KU39 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.33■□□□□ 0.85
Vps41Q5KU39 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.33■□□□□ 0.85
Vps41Q5KU39 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps41Q5KU39 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vps41Q5KU39 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps41Q5KU39 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.33■□□□□ 0.85
Vps41Q5KU39 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps41Q5KU39 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Vps41Q5KU39 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps41Q5KU39 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.33■□□□□ 0.84
Vps41Q5KU39 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Vps41Q5KU39 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps41Q5KU39 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps41Q5KU39 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps41Q5KU39 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.31■□□□□ 0.84
Vps41Q5KU39 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Mir6236-201ENSMUST00000184437 123 ntBASIC20.3■□□□□ 0.84
Vps41Q5KU39 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps41Q5KU39 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps41Q5KU39 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.28■□□□□ 0.84
Vps41Q5KU39 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vps41Q5KU39 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps41Q5KU39 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vps41Q5KU39 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps41Q5KU39 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps41Q5KU39 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Vps41Q5KU39 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps41Q5KU39 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps41Q5KU39 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps41Q5KU39 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Vps41Q5KU39 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.26■□□□□ 0.83
Vps41Q5KU39 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps41Q5KU39 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms